BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035G01SP1|AL430101
(922 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig367 715 0.0
3x_Contig814 294 2e-79
>3x_Contig367
Length = 1846
Score = 715 bits (360), Expect = 0.0
Identities = 369/372 (99%)
Strand = Plus / Plus
Query: 1 aatcttcatagatccaaggtttcttcgtaattggatttatggagaaatcaaccgagattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1463 aatcttcatagatccaaggtttcttcgtaattggatttatggagaaatcaaccgagattt 1522
Query: 61 taccccttttaatattctccttctcattgttcctattagcttgtggcatagtagttgcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1523 taccccttttaatattctccttctcattgttcctattagcttgtggcatagtagttgcat 1582
Query: 121 ttattggtgacctaccacgtttagattttgctatgacactctgatgtgaatgttgtatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1583 ttattggtgacctaccacgtttagattttgctatgacactctgatgtgaatgttgtatgt 1642
Query: 181 tgatatcattctccttcaagatgtctgacgcttgggaatcaaggataatctcgttttctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1643 tgatatcattctccttcaagatgtctgacgcttgggaatcaaggataatctcgttttctt 1702
Query: 241 tcaaaggggaactcatcagctctaaatcacgttgtagtccttgattacgttctcttgcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1703 tcaaaggggaactcatcagctctaaatcacgttgtagtccttgattacgttctcttgcca 1762
Query: 301 atggttcagcgtgttcttgttcaatagtacttttcacagtcgcgtttttcttcacatgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1763 atggttcagcgtgttcttgttcaatagtacttttcacagtcgcgtttttcttcacattta 1822
Query: 361 ttggatcaaact 372
||| |||||||
Sbjct: 1823 ttgtctcaaact 1834
>3x_Contig814
Length = 3416
Score = 294 bits (148), Expect = 2e-79
Identities = 160/164 (97%), Gaps = 1/164 (0%)
Strand = Plus / Minus
Query: 758 agattaaggctaacatggctatagagctccccaacagaagcagattctcagatgtttaca 817
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3408 agattaaggctaacttggctatagagctccccaacagaagcagattctcagatgtttaca 3349
Query: 818 tagctgtagagcttatcacagcatttagggkgggkagaattgcaaaccgacccaattaat 877
|||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 3348 tagctgtagagcttatcacagcatttagggtgggtagaattgcaaaccgacccaattaat 3289
Query: 878 ataatgtcacttaacgattttttggcg-agtcttacggctcaaa 920
||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 3288 ataatgtcacttaacgattttttggcgaagtcttacggctcaaa 3245
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6531
Number of Sequences: 1807
Number of extensions: 6531
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 2
length of query: 922
length of database: 10,358,551
effective HSP length: 16
effective length of query: 906
effective length of database: 10,329,639
effective search space: 9358652934
effective search space used: 9358652934
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)